Job name:

5CE1 chain A

08f48fbe-8885-432c-8005-adccdcc02292
Finished
Electron density map:

Differential EDM:
Models Number of gaps:1 Gap lengths: 5
Model Entanglement Average DOPE-HR (by gap length)
DOPE-HR 1st gap
Model 1 Non-trivial -35361
Model 2 Non-trivial -35127
Model 3 Non-trivial -33998
Model 4 Non-trivial -33968
Model 5 Non-trivial -29875
Reload
Warning: All models are renumbered - the first residue in the structure has index 1.
Mix & match
Provided protein had only one gap - thus there are no gap-filling combinations to be made.

EntanglementHelpKnotProtLassoProtLinkProt
Model Type Knot core Slipknot Lasso Piercing Show
range loop range loop position in JSmol
Model 1 Lasso L -1C -- -- 29-71
Model 2 Lasso L -1C -- -- 29-71
Model 3 Lasso L -1C -- -- 29-71
Model 4 Lasso L -1C -- -- 29-71
Model 5 Lasso L -1C -- -- 29-71
None
Topologies marked by an OK sign () are in accordance with the template topology.
Warning: Entanglement type is assigned automatically - for more complicated topologies there may be some disagreements with manually curated databases.
Model 1
Model 2
Model 3
Model 4
Model 5
DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better.
Since DOPE is calculated against the neighbours of a given amino acid, the scores
can vary between unmoved segments of different models. See here for more information.
Help
PDB
code		 Chain Entanglement
type		 Seq
identity		 Total gap
coverage		 Total gap
identity		 RMSD [Å] Pairwise alignment to the target: gap


1Z8G
A
Unknot
99.73%
40.00%
40.00%
0.65

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGAAGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLP---IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL

1BML
A
Unknot
44.80%
80.00%
40.00%
0.87

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGR-----RKLPVDRIVGGRDTSLGRWPWQVSLRYD-GAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS--PHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQ-QAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: --------------------------------------------------------------------------------------------------AAPSFDCGKPQVEPKKCP-GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCL-EKSPRPSSYKVILGAHQEVNLEPH-----VQEIEVSRLFL-------EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC----FEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTW----------IEGVMRNN

1BML
B
Unknot
44.80%
80.00%
40.00%
0.86

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGR-----RKLPVDRIVGGRDTSLGRWPWQVSLRYD-GAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS--PHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQ-QAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: --------------------------------------------------------------------------------------------------AAPSFDCGKPQVEPKKCP-GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCL-EKSPRPSSYKVILGAHQEVNLEPH-----VQEIEVSRLFL-------EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC----FEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTW----------IEGVMRNN

1DDJ
A
Unknot
44.53%
80.00%
40.00%
1.04

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGR-----RKLPVDRIVGGRDTSLGRWPWQVSLRYD-GAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS--PHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQ-QAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------SFDCGKPQVEPKKCP-GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCL-EKSPRPSSYKVILGAHQEVNLEPH-----VQEIEVSRLFL-------EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC----FEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTW----------IEGVMRNN

1DDJ
B
Unknot
44.53%
80.00%
40.00%
1.01

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGR-----RKLPVDRIVGGRDTSLGRWPWQVSLRYD-GAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS--PHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQ-QAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------SFDCGKPQVEPKKCP-GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCL-EKSPRPSSYKVILGAHQEVNLEPH-----VQEIEVSRLFL-------EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC----FEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTW----------IEGVMRNN

1DDJ
C
Unknot
44.53%
80.00%
40.00%
1.04

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGR-----RKLPVDRIVGGRDTSLGRWPWQVSLRYD-GAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS--PHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQ-QAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------SFDCGKPQVEPKKCP-GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCL-EKSPRPSSYKVILGAHQEVNLEPH-----VQEIEVSRLFL-------EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC----FEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTW----------IEGVMRNN

1DDJ
D
Unknot
44.53%
80.00%
40.00%
1.01

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGR-----RKLPVDRIVGGRDTSLGRWPWQVSLRYD-GAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQAS--PHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQ-QAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------SFDCGKPQVEPKKCP-GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCL-EKSPRPSSYKVILGAHQEVNLEPH-----VQEIEVSRLFL-------EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC----FEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTW----------IEGVMRNN

1O5E
H
Unknot
100.00%
20.00%
20.00%
0.58

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ------------------------------------------------------------------------------------------------------------------IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPF-------NSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL

1O5F
H
Unknot
100.00%
20.00%
20.00%
0.57

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ------------------------------------------------------------------------------------------------------------------IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPF-------NSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL

1P57
B
Unknot
100.00%
20.00%
20.00%
0.57

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ------------------------------------------------------------------------------------------------------------------IVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPF-------NSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQ-

3T2N
A
Unknot
99.41%
20.00%
20.00%
0.78

..Target: -EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: QEPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLP-------RDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWG----------VLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYP--------GDSGGPFVCEDSISRTPRWRLCGIVSL------AQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL

1EPT
A
Unknot
51.16%
20.00%
20.00%
0.70

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ------------------------------------------------------------------------------------------------------------------IVGGYTCAANSIPYQVSLN-SGSHFCGGSLINSQWVVSAAHC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YK

4DGJ
A
Unknot
44.68%
20.00%
20.00%
0.80

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAG---AVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL-
Template: ------------------------------------------------------------------------------------------------------------------IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVIN----P--HYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQ-QQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQE----NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEW-------------IQSFLH

4DGJ
B
Unknot
44.68%
20.00%
20.00%
0.82

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAG---AVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL-
Template: ------------------------------------------------------------------------------------------------------------------IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVIN----P--HYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQ-QQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQE----NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEW-------------IQSFLH

4DGJ
C
Unknot
44.87%
20.00%
20.00%
0.83

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAG---AVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ------------------------------------------------------------------------------------------------------------------IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVIN----P--HYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQ-QQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQE----NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEW-------------IQSFL

4DGJ
D
Unknot
44.87%
20.00%
20.00%
0.81

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAG---AVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ------------------------------------------------------------------------------------------------------------------IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVIN----P--HYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQ-QQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQE----NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEW-------------IQSFL

2HNT
C
Unknot
49.25%
20.00%
20.00%
0.86

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSL--RYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ------------------------------------------------------------------------------------------------------------------IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHC------------------------------------LLYPPW-DKNFTE--NDL-LVRI------------------------------------------------------------------------------------------------------------------------------------------------------GKHS

3T2N
B
Unknot
99.70%
0.00%
0.00%
0.83

..Target: -EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: QEPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKL----------TSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWG----------VLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYP--------GDSGGPFVCEDSISRTPRWRLCGIVSW------AQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQ-

1O5E
L
Unknot
97.27%
0.00%
0.00%
0.71

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL-
Template: -PLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGAAGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLP

1O5F
L
Unknot
97.27%
0.00%
0.00%
0.70

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL-
Template: -PLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGAAGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLP

1P57
A
Unknot
97.27%
0.00%
0.00%
0.69

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL-
Template: -PLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGAAGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLP

1AKS
B
Unknot
47.96%
0.00%
0.00%
0.76

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSYPSLLQCLKAPVLSNSSCK--SSYPGQITGNMICVGFLQGGKDSCQGDSGGPVVC--------NGQLQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI----------AAN

1EPT
C
Unknot
47.96%
0.00%
0.00%
0.80

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSYPSLLQCLKAPVLSNSSCK--SSYPGQITGNMICVGFLQGGKDSCQGDSGGPVVC--------NGQLQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI----------AAN

1EZX
C
Unknot
51.43%
0.00%
0.00%
0.95

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -------------------------------------------------------------------------------------------------------------------------------------------CGGSLINSQWVVSAAHCY------KS--------------------ASKSIVHPSY------NSNTLNNDIMLIKLK-----------ISLPTS--CASAGTQCLI-----------------CLKAPILSDSSCKSA--YPGQITSNMFCAGYL------CQGDSGGPVVC--------SGKLQGIVSWGSGC--AQKPGVYTKVCNYVSWIKQTI----------ASN

1UHB
B
Unknot
47.96%
0.00%
0.00%
0.79

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSYPSLLQCLKAPVLSDSSCK--SSYPGQITGNMICVGFLEGGKDSCQGDSGGPVVC--------NGQLQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTI----------AAN

2HNT
F
Unknot
46.00%
0.00%
0.00%
0.86

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGY--PEG--GIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSVLQVVNLPIVERPVCK--DSTRIRITDNMFCAGYKPDEGKRG-DACEGDSGGPFVMKSPFN--NRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKW-----------IQKVIDQ

2PKS
C
Unknot
46.08%
0.00%
0.00%
0.84

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGY--PEG--GIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQPSVLQVVNLPIVERPVCK--DSTRIRITDNMFCAGYKPDEGKRG-DACEGDSGGPFVMKSPFN--NRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKW-----------IQKVIDQ

3PO1
C
Unknot
46.08%
0.00%
0.00%
0.83

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGY--PEG--GIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQPSVLQVVNLPIVERPVCK--DSTRIRITDNMFCAGYKPDEGKRG-DACEGDSGGPFVMKSPFN--NRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKW-----------IQKVIDQ

1RIW
C
Unknot
46.08%
0.00%
0.00%
0.85

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGY--PEG--GIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQPSVLQVVNLPIVERPVCK--DSTRIRITDNMFCAGYKPDEGKRG-DACEGDSGGPFVMKSPFN--NRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKW-----------IQKVIDQ

1BHX
F
Unknot
46.67%
0.00%
0.00%
0.86

..Target: EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGY--PEG--GIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL
Template: ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQPSVLQVVNLPIVERPVCK--DSTRIRITDNMFCAGYKPDEGKRG-DACEGDSGGPFVMKSPFN--NRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE--------
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PDB
code		 Chain Knot
type		 Gap
coverage		 Gap
identity		 >Target_Sequence: gap

RKLPVDRIVGG
1Z8G A Unknot 40.00% 40.00%

RKLP---IVGG
1BML A Unknot 40.00% 80.00%

KKCP-GRVVGG
1BML B Unknot 40.00% 80.00%

KKCP-GRVVGG
1DDJ A Unknot 40.00% 80.00%

KKCP-GRVVGG
1DDJ B Unknot 40.00% 80.00%

KKCP-GRVVGG
1DDJ C Unknot 40.00% 80.00%

KKCP-GRVVGG
1DDJ D Unknot 40.00% 80.00%

KKCP-GRVVGG
1O5E H Unknot 20.00% 20.00%

-------IVGG
1O5F H Unknot 20.00% 20.00%

-------IVGG
1P57 B Unknot 20.00% 20.00%

-------IVGG
3T2N A Unknot 20.00% 20.00%

RKLP-------
1EPT A Unknot 20.00% 20.00%

-------IVGG
4DGJ A Unknot 20.00% 20.00%

-------IVGG
4DGJ B Unknot 20.00% 20.00%

-------IVGG
4DGJ C Unknot 20.00% 20.00%

-------IVGG
4DGJ D Unknot 20.00% 20.00%

-------IVGG
2HNT C Unknot 20.00% 20.00%

-------IVEG
3T2N B Unknot 0.00% 0.00%

RKL--------
1O5E L Unknot 0.00% 0.00%

R----------
1O5F L Unknot 0.00% 0.00%

R----------
1P57 A Unknot 0.00% 0.00%

R----------
1AKS B Unknot 0.00% 0.00%

-----------
1EPT C Unknot 0.00% 0.00%

-----------
1EZX C Unknot 0.00% 0.00%

-----------
1UHB B Unknot 0.00% 0.00%

-----------
2HNT F Unknot 0.00% 0.00%

-----------
2PKS C Unknot 0.00% 0.00%

-----------
3PO1 C Unknot 0.00% 0.00%

-----------
1RIW C Unknot 0.00% 0.00%

-----------
1BHX F Unknot 0.00% 0.00%

-----------

Models
Similarity profile
Modelling alignment

Tue Jul 11 17:30:30 2017	JOB CREATED : 08f48fbe-8885-432c-8005-adccdcc02292
Tue Jul 11 21:42:02 2017	STATUS CHANGED : N -> R
Tue Jul 11 21:42:02 2017	INFO : JOB STARTED AT: 2017-07-11 21:42:02.698609
Tue Jul 11 21:42:02 2017	INFO : METHOD: 1
Tue Jul 11 21:42:02 2017	INFO : Precalculated profile found...
Tue Jul 11 21:42:02 2017	INFO : Homologue pool found...
Tue Jul 11 21:42:02 2017	INFO : Verifying structure sequences of homologues...
Tue Jul 11 22:21:20 2017	INFO : Starting homologue filtering...
Tue Jul 11 22:26:43 2017	INFO : Getting structures from PDB...
Tue Jul 11 22:28:08 2017	INFO : Creating modelling alignment...
Tue Jul 11 22:28:09 2017	INFO : Modelling...
Tue Jul 11 23:59:35 2017	INFO : Finished modelling
Tue Jul 11 23:59:35 2017	STATUS CHANGED : R -> P
Tue Jul 11 23:59:35 2017	INFO : Checking topology...
Wed Jul 12 00:10:43 2017	INFO : Knot matrices done...
Wed Jul 12 00:10:43 2017	INFO : No knots found...
Wed Jul 12 00:10:51 2017	INFO : Some lassos found!
Wed Jul 12 00:10:51 2017	INFO : Finishing...
Wed Jul 12 00:10:52 2017	INFO : Job done
Wed Jul 12 00:10:52 2017	STATUS CHANGED : P -> F
Wed Jul 12 00:10:52 2017	STATUS CHANGED : F -> F
GapRepairer | Interdisciplinary Laboratory of Biological Systems Modelling