| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
4P12 |
A |
Unknot |
99.66% |
200.00% |
200.00% |
0.48 |
..Target: -QLTVPNIPLNNLANSRVPAMINKMTVSTDQNQVVQFQNGRCTLEGQLLGTTPVSASQVARIRGKVFSTASGKGLNLTELDGTPYHAFESPAPLGFPDIGACDWHVSTFKVDQNLSGDPMSRLDVKQNAPFAPHLGSIEFTSDQDPTGDQLGTLAWVSPSTSGARVDPWKIPSYGSTVTESTHLAPPIFPPGFGEAIVYFMSDFPIVSGNTAQVPCTLPQEFVSHFVEQQAPVRGEAALLHYVDPDTHRNLGEFKLYPDGFITCVPNTGGGPQNLPTNGVFVFSSWVSRYYQLKPVG |
||||
Sun Jul 23 14:55:08 2017 JOB CREATED : 5b993982-b55a-4f8c-bee9-2f705c19581d Sun Jul 23 15:04:02 2017 STATUS CHANGED : N -> R Sun Jul 23 15:04:02 2017 INFO : JOB STARTED AT: 2017-07-23 15:04:02.078020 Sun Jul 23 15:04:02 2017 INFO : METHOD: 1 Sun Jul 23 15:04:02 2017 INFO : Precalculated profile found... Sun Jul 23 15:04:02 2017 INFO : Homologue pool found... Sun Jul 23 15:04:02 2017 INFO : Verifying structure sequences of homologues... Sun Jul 23 15:09:34 2017 INFO : Starting homologue filtering... Sun Jul 23 15:10:22 2017 INFO : Getting structures from PDB... Sun Jul 23 15:10:26 2017 INFO : Creating modelling alignment... Sun Jul 23 15:10:26 2017 INFO : Modelling... Sun Jul 23 15:12:48 2017 INFO : Model 1 built Sun Jul 23 15:12:48 2017 INFO : Validating Calpha distances... Sun Jul 23 15:12:48 2017 INFO : Model 1 distances correct: True Sun Jul 23 15:12:48 2017 INFO : Modelling... Sun Jul 23 15:15:17 2017 INFO : Model 2 built Sun Jul 23 15:15:17 2017 INFO : Validating Calpha distances... Sun Jul 23 15:15:17 2017 INFO : Model 2 distances correct: True Sun Jul 23 15:15:17 2017 INFO : Modelling... Sun Jul 23 15:17:47 2017 INFO : Model 3 built Sun Jul 23 15:17:47 2017 INFO : Validating Calpha distances... Sun Jul 23 15:17:47 2017 INFO : Model 3 distances correct: True Sun Jul 23 15:17:47 2017 INFO : Modelling... Sun Jul 23 15:20:04 2017 INFO : Model 4 built Sun Jul 23 15:20:04 2017 INFO : Validating Calpha distances... Sun Jul 23 15:20:04 2017 INFO : Model 4 distances correct: True Sun Jul 23 15:20:04 2017 INFO : Modelling... Sun Jul 23 15:23:45 2017 INFO : Model 5 built Sun Jul 23 15:23:45 2017 INFO : Validating Calpha distances... Sun Jul 23 15:23:45 2017 INFO : Model 5 distances correct: True Sun Jul 23 15:24:04 2017 INFO : Finished modelling Sun Jul 23 15:24:04 2017 STATUS CHANGED : R -> P Sun Jul 23 15:24:04 2017 INFO : Checking topology... Sun Jul 23 15:28:08 2017 INFO : Knot matrices done... Sun Jul 23 15:28:14 2017 INFO : No knots found... Sun Jul 23 15:28:14 2017 INFO : No lassos found... Sun Jul 23 15:28:14 2017 INFO : Finishing... Sun Jul 23 15:28:14 2017 INFO : Job done Sun Jul 23 15:28:14 2017 STATUS CHANGED : P -> F Sun Jul 23 15:28:14 2017 STATUS CHANGED : F -> F |
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