| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
2JED |
A |
Unknot |
97.24% |
100.00% |
97.44% |
0.86 |
..Target: --IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFRNFXF---- |
||||
Fri Dec 1 09:45:19 2017 JOB CREATED : 821121e7-902e-4b22-9686-bef35aafe611 Fri Dec 1 21:37:02 2017 STATUS CHANGED : N -> R Fri Dec 1 21:37:02 2017 INFO : JOB STARTED AT: 2017-12-01 21:37:02.214600 Fri Dec 1 21:37:02 2017 INFO : METHOD: 1 Fri Dec 1 21:37:02 2017 INFO : Precalculated profile found... Fri Dec 1 21:37:02 2017 INFO : Homologue pool found... Fri Dec 1 21:37:02 2017 INFO : Verifying structure sequences of homologues... Sat Dec 2 00:03:46 2017 INFO : Starting homologue filtering... Sat Dec 2 00:04:45 2017 INFO : Getting structures from PDB... Sat Dec 2 00:04:49 2017 INFO : Creating modelling alignment... Sat Dec 2 00:04:49 2017 INFO : Modelling... Sat Dec 2 00:11:49 2017 INFO : Model 1 built Sat Dec 2 00:11:49 2017 INFO : Validating Calpha distances... Sat Dec 2 00:11:49 2017 INFO : Model 1 distances correct: True Sat Dec 2 00:11:49 2017 INFO : Modelling... Sat Dec 2 00:23:16 2017 INFO : Model 2 built Sat Dec 2 00:23:16 2017 INFO : Validating Calpha distances... Sat Dec 2 00:23:16 2017 INFO : Model 2 distances correct: True Sat Dec 2 00:23:16 2017 INFO : Modelling... Sat Dec 2 00:30:23 2017 INFO : Model 3 built Sat Dec 2 00:30:23 2017 INFO : Validating Calpha distances... Sat Dec 2 00:30:23 2017 INFO : Model 3 distances correct: True Sat Dec 2 00:30:23 2017 INFO : Modelling... Sat Dec 2 00:42:08 2017 INFO : Model 4 built Sat Dec 2 00:42:08 2017 INFO : Validating Calpha distances... Sat Dec 2 00:42:08 2017 INFO : Model 4 distances correct: True Sat Dec 2 00:42:08 2017 INFO : Modelling... Sat Dec 2 00:49:07 2017 INFO : Model 5 built Sat Dec 2 00:49:07 2017 INFO : Validating Calpha distances... Sat Dec 2 00:49:07 2017 INFO : Model 5 distances correct: True Sat Dec 2 00:49:50 2017 INFO : Finished modelling Sat Dec 2 00:49:50 2017 STATUS CHANGED : R -> P Sat Dec 2 00:49:50 2017 INFO : Checking topology... Sat Dec 2 00:51:04 2017 INFO : Knot matrices done... Sat Dec 2 00:51:04 2017 INFO : No knots found... Sat Dec 2 00:51:04 2017 INFO : No lassos found... Sat Dec 2 00:51:04 2017 INFO : Finishing... Sat Dec 2 00:51:04 2017 STATUS CHANGED : P -> E Sat Dec 2 00:51:04 2017 ERROR : Error while finishing Sat Dec 2 00:51:04 2017 STATUS CHANGED : E -> F |
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