| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
2OBI |
A |
Unknot |
39.39% |
94.74% |
52.63% |
0.89 |
..Target: SEF------YKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSG--MLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKEV |
||||
2WGR |
A |
Unknot |
43.56% |
100.00% |
42.11% |
0.93 |
..Target: S--EFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTPQ-YKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKEV |
||||
Sun Jul 23 14:55:29 2017 JOB CREATED : 1713247d-190d-4dda-9c99-f970c3fb89ce Sun Jul 23 16:06:01 2017 STATUS CHANGED : N -> R Sun Jul 23 16:06:01 2017 INFO : JOB STARTED AT: 2017-07-23 16:06:01.928476 Sun Jul 23 16:06:01 2017 INFO : METHOD: 1 Sun Jul 23 16:06:01 2017 INFO : Precalculated profile found... Sun Jul 23 16:06:02 2017 INFO : Homologue pool found... Sun Jul 23 16:06:02 2017 INFO : Verifying structure sequences of homologues... Sun Jul 23 16:17:00 2017 INFO : Starting homologue filtering... Sun Jul 23 16:17:39 2017 INFO : Getting structures from PDB... Sun Jul 23 16:17:43 2017 INFO : Creating modelling alignment... Sun Jul 23 16:17:43 2017 INFO : Modelling... Sun Jul 23 16:19:00 2017 INFO : Model 1 built Sun Jul 23 16:19:00 2017 INFO : Validating Calpha distances... Sun Jul 23 16:19:00 2017 INFO : Model 1 distances correct: True Sun Jul 23 16:19:00 2017 INFO : Modelling... Sun Jul 23 16:20:55 2017 INFO : Model 2 built Sun Jul 23 16:20:55 2017 INFO : Validating Calpha distances... Sun Jul 23 16:20:55 2017 INFO : Model 2 distances correct: True Sun Jul 23 16:20:55 2017 INFO : Modelling... Sun Jul 23 16:22:10 2017 INFO : Model 3 built Sun Jul 23 16:22:10 2017 INFO : Validating Calpha distances... Sun Jul 23 16:22:10 2017 INFO : Model 3 distances correct: True Sun Jul 23 16:22:10 2017 INFO : Modelling... Sun Jul 23 16:23:31 2017 INFO : Model 4 built Sun Jul 23 16:23:31 2017 INFO : Validating Calpha distances... Sun Jul 23 16:23:31 2017 INFO : Model 4 distances correct: True Sun Jul 23 16:23:31 2017 INFO : Modelling... Sun Jul 23 16:24:52 2017 INFO : Model 5 built Sun Jul 23 16:24:52 2017 INFO : Validating Calpha distances... Sun Jul 23 16:24:52 2017 INFO : Model 5 distances correct: True Sun Jul 23 16:25:05 2017 INFO : Finished modelling Sun Jul 23 16:25:05 2017 STATUS CHANGED : R -> P Sun Jul 23 16:25:05 2017 INFO : Checking topology... Sun Jul 23 16:26:10 2017 INFO : Knot matrices done... Sun Jul 23 16:26:10 2017 INFO : No knots found... Sun Jul 23 16:26:10 2017 INFO : No lassos found... Sun Jul 23 16:26:10 2017 INFO : Finishing... Sun Jul 23 16:26:10 2017 INFO : Job done Sun Jul 23 16:26:10 2017 STATUS CHANGED : P -> F Sun Jul 23 16:26:10 2017 STATUS CHANGED : F -> F |
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