| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
4OO2 |
C |
Unknot |
99.80% |
100.00% |
100.00% |
0.43 |
..Target: -TRPLTGEEYLESLRDAREVYLDGSRVKDVTAHPAFHNPARXTARLYDSLHDPAQKAVLTAPTDAGDGFTHRFFTAPRSVDDLVKDQAAIASWARKSYGWXGRSPDYKASFLGTLGANADFYEPFADNARRWYRESQEKVLYWNHAFLHPPVDRSLPADEVGDVFIHVERETDAGLVVSGAKVVATGSALTHAAFISHWGLPIKDRKFALVATVPXDADGLKVICRPSYSANAATTGSPFDNPLSSRLDENDAILVLDQVLIPWENVFVYGNLGKVHLLAGQSGXIERATFHGCTRLAVKLEFIAGLLAKALDITGAKDFRGVQTRLGEVLAWRNLFWSLSDAAARNPVPWKNGTLLPNPQAGXAYRWFXQIGYPRVLEIVQQDVASGLXYVNSSTEDFRNPETGPYLEKYLRGSDGAGAVERVKVXKLLWDAVGSDFGGRHELYERNYSGNHENTRIELLLSQTASGKLDSYXDFAQACXDEYDLDGWTAPDLESFHAXRSASRDLLGGL |
||||
Fri Jan 18 14:24:25 2019 JOB CREATED : 28ee087d-9131-436b-9bea-bd0c14b5a219 Fri Jan 18 14:25:02 2019 STATUS CHANGED : N -> R Fri Jan 18 14:25:02 2019 INFO : JOB STARTED AT: 2019-01-18 14:25:02.325233 Fri Jan 18 14:25:02 2019 INFO : METHOD: 1 Fri Jan 18 14:25:02 2019 INFO : Building Profile... Fri Jan 18 14:25:02 2019 INFO : --E-value set to 0.001-- Fri Jan 18 14:36:17 2019 INFO : Homologue pool found... Fri Jan 18 14:36:17 2019 INFO : Verifying structure sequences of homologues... Fri Jan 18 14:37:09 2019 INFO : Starting homologue filtering... Fri Jan 18 14:38:21 2019 INFO : Getting structures from PDB... Fri Jan 18 14:38:34 2019 INFO : Creating modelling alignment... Fri Jan 18 14:38:34 2019 INFO : Adding other chains Fri Jan 18 14:38:34 2019 INFO : Modelling... Fri Jan 18 14:46:31 2019 INFO : Model 1 built Fri Jan 18 14:46:31 2019 INFO : Validating Calpha distances... Fri Jan 18 14:46:31 2019 INFO : Model 1 distances correct: True Fri Jan 18 14:46:31 2019 INFO : Modelling... Fri Jan 18 14:54:19 2019 INFO : Model 2 built Fri Jan 18 14:54:19 2019 INFO : Validating Calpha distances... Fri Jan 18 14:54:19 2019 INFO : Model 2 distances correct: True Fri Jan 18 14:54:19 2019 INFO : Modelling... Fri Jan 18 15:02:12 2019 INFO : Model 3 built Fri Jan 18 15:02:12 2019 INFO : Validating Calpha distances... Fri Jan 18 15:02:12 2019 INFO : Model 3 distances correct: True Fri Jan 18 15:02:12 2019 INFO : Modelling... Fri Jan 18 15:10:06 2019 INFO : Model 4 built Fri Jan 18 15:10:06 2019 INFO : Validating Calpha distances... Fri Jan 18 15:10:06 2019 INFO : Model 4 distances correct: True Fri Jan 18 15:10:06 2019 INFO : Modelling... Fri Jan 18 15:18:00 2019 INFO : Model 5 built Fri Jan 18 15:18:00 2019 INFO : Validating Calpha distances... Fri Jan 18 15:18:00 2019 INFO : Model 5 distances correct: True Fri Jan 18 15:21:19 2019 INFO : Finished modelling Fri Jan 18 15:21:19 2019 STATUS CHANGED : R -> P Fri Jan 18 15:21:45 2019 INFO : Finished edm surfaces: success Fri Jan 18 15:21:45 2019 INFO : Checking topology... Fri Jan 18 15:23:30 2019 INFO : Knot matrices done... Fri Jan 18 15:23:30 2019 INFO : No knots found... Fri Jan 18 15:23:30 2019 INFO : No lassos found... Fri Jan 18 15:23:30 2019 INFO : Finishing... Fri Jan 18 15:23:31 2019 INFO : Job done Fri Jan 18 15:23:31 2019 STATUS CHANGED : P -> F Fri Jan 18 15:23:31 2019 STATUS CHANGED : F -> F |
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