| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
2B1V |
B |
Unknot |
98.36% |
100.00% |
100.00% |
0.50 |
..Target: SLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLSDLLLEMLDAHR |
||||
Thu Jul 4 20:25:10 2019 JOB CREATED : 2c43964b-4237-4f2f-add1-ae658b2fa4be Thu Jul 4 20:26:02 2019 STATUS CHANGED : N -> R Thu Jul 4 20:26:02 2019 INFO : JOB STARTED AT: 2019-07-04 20:26:02.144606 Thu Jul 4 20:26:02 2019 INFO : METHOD: 1 Thu Jul 4 20:26:02 2019 INFO : Building Profile... Thu Jul 4 20:26:02 2019 INFO : --E-value set to 0.001-- Thu Jul 4 20:36:35 2019 INFO : Homologue pool found... Thu Jul 4 20:36:35 2019 INFO : Verifying structure sequences of homologues... Thu Jul 4 21:28:16 2019 INFO : Starting homologue filtering... Thu Jul 4 21:28:40 2019 INFO : Getting structures from PDB... Thu Jul 4 21:28:43 2019 INFO : Creating modelling alignment... Thu Jul 4 21:28:43 2019 INFO : Modelling... Thu Jul 4 21:30:26 2019 INFO : Model 1 built Thu Jul 4 21:30:26 2019 INFO : Validating Calpha distances... Thu Jul 4 21:30:26 2019 INFO : Model 1 distances correct: True Thu Jul 4 21:30:26 2019 INFO : Modelling... Thu Jul 4 21:32:07 2019 INFO : Model 2 built Thu Jul 4 21:32:07 2019 INFO : Validating Calpha distances... Thu Jul 4 21:32:07 2019 INFO : Model 2 distances correct: True Thu Jul 4 21:32:07 2019 INFO : Modelling... Thu Jul 4 21:33:48 2019 INFO : Model 3 built Thu Jul 4 21:33:48 2019 INFO : Validating Calpha distances... Thu Jul 4 21:33:48 2019 INFO : Model 3 distances correct: True Thu Jul 4 21:33:48 2019 INFO : Modelling... Thu Jul 4 21:35:32 2019 INFO : Model 4 built Thu Jul 4 21:35:32 2019 INFO : Validating Calpha distances... Thu Jul 4 21:35:32 2019 INFO : Model 4 distances correct: True Thu Jul 4 21:35:32 2019 INFO : Modelling... Thu Jul 4 21:37:15 2019 INFO : Model 5 built Thu Jul 4 21:37:15 2019 INFO : Validating Calpha distances... Thu Jul 4 21:37:15 2019 INFO : Model 5 distances correct: True Thu Jul 4 21:37:30 2019 INFO : Finished modelling Thu Jul 4 21:37:30 2019 STATUS CHANGED : R -> P Thu Jul 4 21:37:40 2019 INFO : Finished edm surfaces: success Thu Jul 4 21:37:40 2019 INFO : Checking topology... Thu Jul 4 21:37:41 2019 INFO : Knot matrices done... Thu Jul 4 21:37:41 2019 INFO : No knots found... Thu Jul 4 21:37:41 2019 INFO : No lassos found... Thu Jul 4 21:37:41 2019 INFO : Finishing... Thu Jul 4 21:37:41 2019 INFO : Job done Thu Jul 4 21:37:41 2019 STATUS CHANGED : P -> F Thu Jul 4 21:37:41 2019 STATUS CHANGED : F -> F |
GapRepairer