| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
4RIW |
C |
Unknot |
100.00% |
100.00% |
100.00% |
0.51 |
..Target: VLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIK |
||||
Mon Jan 29 13:31:51 2018 JOB CREATED : ce975cf3-727d-44fc-8c27-98c26260e17d Mon Jan 29 13:32:01 2018 STATUS CHANGED : N -> R Mon Jan 29 13:32:01 2018 INFO : JOB STARTED AT: 2018-01-29 13:32:01.829921 Mon Jan 29 13:32:01 2018 INFO : METHOD: 1 Mon Jan 29 13:32:01 2018 INFO : Precalculated profile found... Mon Jan 29 13:32:01 2018 INFO : Homologue pool found... Mon Jan 29 13:32:01 2018 INFO : Verifying structure sequences of homologues... Mon Jan 29 18:15:18 2018 INFO : Starting homologue filtering... Mon Jan 29 18:15:50 2018 INFO : Getting structures from PDB... Mon Jan 29 18:15:56 2018 INFO : Creating modelling alignment... Mon Jan 29 18:15:56 2018 INFO : Adding other chains Mon Jan 29 18:15:56 2018 INFO : Modelling... Mon Jan 29 18:26:11 2018 INFO : Model 1 built Mon Jan 29 18:26:11 2018 INFO : Validating Calpha distances... Mon Jan 29 18:26:11 2018 INFO : Model 1 distances correct: True Mon Jan 29 18:26:11 2018 INFO : Modelling... Mon Jan 29 18:32:08 2018 INFO : Model 2 built Mon Jan 29 18:32:08 2018 INFO : Validating Calpha distances... Mon Jan 29 18:32:08 2018 INFO : Model 2 distances correct: True Mon Jan 29 18:32:08 2018 INFO : Modelling... Mon Jan 29 18:38:19 2018 INFO : Model 3 built Mon Jan 29 18:38:19 2018 INFO : Validating Calpha distances... Mon Jan 29 18:38:19 2018 INFO : Model 3 distances correct: True Mon Jan 29 18:38:19 2018 INFO : Modelling... Mon Jan 29 18:47:14 2018 INFO : Model 4 built Mon Jan 29 18:47:14 2018 INFO : Validating Calpha distances... Mon Jan 29 18:47:14 2018 INFO : Model 4 distances correct: True Mon Jan 29 18:47:14 2018 INFO : Modelling... Mon Jan 29 18:53:19 2018 INFO : Model 5 built Mon Jan 29 18:53:19 2018 INFO : Validating Calpha distances... Mon Jan 29 18:53:19 2018 INFO : Model 5 distances correct: True Mon Jan 29 18:54:47 2018 INFO : Finished modelling Mon Jan 29 18:54:47 2018 STATUS CHANGED : R -> P Mon Jan 29 18:54:47 2018 INFO : Checking topology... Mon Jan 29 18:55:21 2018 INFO : Knot matrices done... Mon Jan 29 18:55:21 2018 INFO : No knots found... Mon Jan 29 18:55:21 2018 INFO : No lassos found... Mon Jan 29 18:55:21 2018 INFO : Finishing... Mon Jan 29 18:55:21 2018 STATUS CHANGED : P -> E Mon Jan 29 18:55:21 2018 ERROR : Error while finishing Mon Jan 29 18:55:21 2018 STATUS CHANGED : E -> F |
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