When you publish results using GapRepairer server, please cite the following papers:
Lassos:
- Dabrowski-Tumanski P, Niemyska W, Pasznik P, Sulkowska JI (2016) LassoProt: Server to analyze biopolymers with lassos. Nucleic Acids Research, 44 (W1) W383-W389
- Niemyska W, Dabrowski-Tumanski P, Kadlof M, Haglund E, Sułkowski P, Sulkowska JI (2016) Complex lasso: new entangled motifs in proteins. Scientific Reports 6, 36895
- Dabrowski-Tumanski P, Sulkowska JI (2017) Unique properties of lasso proteins.
Knots:
- Jamroz M, Niemyska W, Rawdon EJ, Stasiak A, Millett KC, Sułkowski P, Sulkowska JI (2014) KnotProt: a database of proteins with knots and slipknots. Nucleic Acids Research D1, D306-D314
- Sulkowska JI, Rawdon EJ, Millett KC, Onuchic JN, Stasiak A (2012) Conservation of complex knotting and slipknotting patterns in proteins. PNAS 109(26), E1715-E1723
The server is stored and mantained by:
Interdisciplinary Laboratory of Biological Systems Modelling
Center of New Technology, University of Warsaw
Questions should be addressed to: Joanna Sulkowska (j.sulkowska AT cent.uw.edu.pl)
Any technical difficulties and remarks please report to: Aleksandra Jarmolinska (a.jarmolinska AT cent.uw.edu.pl)
GapRepairer | Interdisciplinary Laboratory of Biological Systems Modelling
GapRepairer