| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
1L2J |
B |
Unknot |
95.52% |
81.82% |
81.82% |
0.88 |
..Target: --------LSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEMLNA |
||||
3OLL |
A |
Unknot |
98.72% |
81.82% |
81.82% |
0.96 |
..Target: -LSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEMLNA- |
||||
Sun Aug 18 13:57:51 2019 JOB CREATED : 01bd4771-1353-4147-bd20-be541d50748e Sun Aug 18 13:58:01 2019 STATUS CHANGED : N -> R Sun Aug 18 13:58:01 2019 INFO : JOB STARTED AT: 2019-08-18 13:58:01.933048 Sun Aug 18 13:58:01 2019 INFO : METHOD: 1 Sun Aug 18 13:58:02 2019 INFO : Building Profile... Sun Aug 18 13:58:02 2019 INFO : --E-value set to 0.001-- Sun Aug 18 14:09:23 2019 INFO : Homologue pool found... Sun Aug 18 14:09:23 2019 INFO : Verifying structure sequences of homologues... Sun Aug 18 15:02:09 2019 INFO : Starting homologue filtering... Sun Aug 18 15:02:39 2019 INFO : Getting structures from PDB... Sun Aug 18 15:02:45 2019 INFO : Creating modelling alignment... Sun Aug 18 15:02:45 2019 INFO : Modelling... Sun Aug 18 15:03:55 2019 INFO : Model 1 built Sun Aug 18 15:03:55 2019 INFO : Validating Calpha distances... Sun Aug 18 15:03:55 2019 INFO : Model 1 distances correct: True Sun Aug 18 15:03:55 2019 INFO : Modelling... Sun Aug 18 15:05:08 2019 INFO : Model 2 built Sun Aug 18 15:05:08 2019 INFO : Validating Calpha distances... Sun Aug 18 15:05:08 2019 INFO : Model 2 distances correct: True Sun Aug 18 15:05:08 2019 INFO : Modelling... Sun Aug 18 15:06:21 2019 INFO : Model 3 built Sun Aug 18 15:06:21 2019 INFO : Validating Calpha distances... Sun Aug 18 15:06:21 2019 INFO : Model 3 distances correct: True Sun Aug 18 15:06:21 2019 INFO : Modelling... Sun Aug 18 15:08:25 2019 INFO : Model 4 built Sun Aug 18 15:08:25 2019 INFO : Validating Calpha distances... Sun Aug 18 15:08:25 2019 INFO : Model 4 distances correct: True Sun Aug 18 15:08:25 2019 INFO : Modelling... Sun Aug 18 15:09:39 2019 INFO : Model 5 built Sun Aug 18 15:09:39 2019 INFO : Validating Calpha distances... Sun Aug 18 15:09:39 2019 INFO : Model 5 distances correct: True Sun Aug 18 15:09:56 2019 INFO : Finished modelling Sun Aug 18 15:09:56 2019 STATUS CHANGED : R -> P Sun Aug 18 15:09:57 2019 INFO : Finished edm surfaces: no map Sun Aug 18 15:09:57 2019 INFO : Checking topology... Sun Aug 18 15:10:21 2019 INFO : Knot matrices done... Sun Aug 18 15:10:21 2019 INFO : No knots found... Sun Aug 18 15:10:21 2019 INFO : No lassos found... Sun Aug 18 15:10:21 2019 INFO : Finishing... Sun Aug 18 15:10:22 2019 INFO : Job done Sun Aug 18 15:10:22 2019 STATUS CHANGED : P -> F Sun Aug 18 15:10:22 2019 STATUS CHANGED : F -> F |
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