| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
1A28 |
A |
Unknot |
100.00% |
100.00% |
100.00% |
0.77 |
..Target: QLIPPLINLLMSIEPDVIYAGHDNTKPDTSSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEEMRSSYIRELIKAIGLRQKGVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSVEFPEMMSEVIAAQLPKILAGMVKPLLFHK |
||||
Thu Jan 30 19:27:44 2020 JOB CREATED : 0207e5ee-6e39-4f6d-99cb-99dc45345bd7 Thu Jan 30 19:28:02 2020 STATUS CHANGED : N -> R Thu Jan 30 19:28:02 2020 INFO : JOB STARTED AT: 2020-01-30 19:28:02.254552 Thu Jan 30 19:28:02 2020 INFO : METHOD: 2 Thu Jan 30 19:28:02 2020 INFO : Building Profile... Thu Jan 30 19:28:02 2020 INFO : --E-value set to 2.0-- Thu Jan 30 19:38:41 2020 INFO : Homologue pool found... Thu Jan 30 19:38:41 2020 INFO : Verifying structure sequences of homologues... Thu Jan 30 20:33:36 2020 INFO : Starting homologue filtering... Thu Jan 30 20:33:59 2020 INFO : Getting structures from PDB... Thu Jan 30 20:34:03 2020 INFO : Creating modelling alignment... Thu Jan 30 20:34:03 2020 INFO : Modelling... Thu Jan 30 20:35:17 2020 INFO : Model 1 built Thu Jan 30 20:35:17 2020 INFO : Validating Calpha distances... Thu Jan 30 20:35:17 2020 INFO : Model 1 distances correct: True Thu Jan 30 20:35:17 2020 INFO : Modelling... Thu Jan 30 20:36:31 2020 INFO : Model 2 built Thu Jan 30 20:36:31 2020 INFO : Validating Calpha distances... Thu Jan 30 20:36:31 2020 INFO : Model 2 distances correct: True Thu Jan 30 20:36:31 2020 INFO : Modelling... Thu Jan 30 20:38:33 2020 INFO : Model 3 built Thu Jan 30 20:38:33 2020 INFO : Validating Calpha distances... Thu Jan 30 20:38:33 2020 INFO : Model 3 distances correct: True Thu Jan 30 20:38:33 2020 INFO : Modelling... Thu Jan 30 20:39:46 2020 INFO : Model 4 built Thu Jan 30 20:39:46 2020 INFO : Validating Calpha distances... Thu Jan 30 20:39:46 2020 INFO : Model 4 distances correct: True Thu Jan 30 20:39:46 2020 INFO : Modelling... Thu Jan 30 20:40:59 2020 INFO : Model 5 built Thu Jan 30 20:40:59 2020 INFO : Validating Calpha distances... Thu Jan 30 20:40:59 2020 INFO : Model 5 distances correct: True Thu Jan 30 20:41:15 2020 INFO : Finished modelling Thu Jan 30 20:41:15 2020 STATUS CHANGED : R -> P Thu Jan 30 20:41:26 2020 INFO : Finished edm surfaces: success Thu Jan 30 20:41:26 2020 INFO : Checking topology... Thu Jan 30 20:41:51 2020 INFO : Knot matrices done... Thu Jan 30 20:41:51 2020 INFO : No knots found... Thu Jan 30 20:41:51 2020 INFO : No lassos found... Thu Jan 30 20:41:51 2020 INFO : Finishing... Thu Jan 30 20:41:51 2020 INFO : Job done Thu Jan 30 20:41:51 2020 STATUS CHANGED : P -> F Thu Jan 30 20:41:51 2020 STATUS CHANGED : F -> F |
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