| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
3ADU |
B |
Unknot |
100.00% |
100.00% |
100.00% |
0.85 |
..Target: AIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY |
||||
Thu Mar 14 18:04:53 2019 JOB CREATED : 3b256e41-9e56-4d6f-b7d4-fb7ac6eca48d Thu Mar 14 18:05:02 2019 STATUS CHANGED : N -> R Thu Mar 14 18:05:02 2019 INFO : JOB STARTED AT: 2019-03-14 18:05:02.367142 Thu Mar 14 18:05:02 2019 INFO : METHOD: 1 Thu Mar 14 18:05:02 2019 INFO : Building Profile... Thu Mar 14 18:05:02 2019 INFO : --E-value set to 0.001-- Thu Mar 14 18:17:33 2019 INFO : Homologue pool found... Thu Mar 14 18:17:33 2019 INFO : Verifying structure sequences of homologues... Thu Mar 14 19:43:37 2019 INFO : Starting homologue filtering... Thu Mar 14 19:45:14 2019 INFO : Getting structures from PDB... Thu Mar 14 19:45:19 2019 INFO : Creating modelling alignment... Thu Mar 14 19:45:19 2019 INFO : Modelling... Thu Mar 14 19:47:01 2019 INFO : Model 1 built Thu Mar 14 19:47:01 2019 INFO : Validating Calpha distances... Thu Mar 14 19:47:01 2019 INFO : Model 1 distances correct: True Thu Mar 14 19:47:01 2019 INFO : Modelling... Thu Mar 14 19:48:42 2019 INFO : Model 2 built Thu Mar 14 19:48:42 2019 INFO : Validating Calpha distances... Thu Mar 14 19:48:42 2019 INFO : Model 2 distances correct: True Thu Mar 14 19:48:42 2019 INFO : Modelling... Thu Mar 14 19:50:25 2019 INFO : Model 3 built Thu Mar 14 19:50:25 2019 INFO : Validating Calpha distances... Thu Mar 14 19:50:25 2019 INFO : Model 3 distances correct: True Thu Mar 14 19:50:25 2019 INFO : Modelling... Thu Mar 14 19:52:07 2019 INFO : Model 4 built Thu Mar 14 19:52:07 2019 INFO : Validating Calpha distances... Thu Mar 14 19:52:07 2019 INFO : Model 4 distances correct: True Thu Mar 14 19:52:07 2019 INFO : Modelling... Thu Mar 14 19:53:48 2019 INFO : Model 5 built Thu Mar 14 19:53:48 2019 INFO : Validating Calpha distances... Thu Mar 14 19:53:48 2019 INFO : Model 5 distances correct: True Thu Mar 14 19:54:11 2019 INFO : Finished modelling Thu Mar 14 19:54:11 2019 STATUS CHANGED : R -> P Thu Mar 14 19:54:21 2019 INFO : Finished edm surfaces: success Thu Mar 14 19:54:21 2019 INFO : Checking topology... Thu Mar 14 19:54:22 2019 INFO : Knot matrices done... Thu Mar 14 19:54:22 2019 INFO : No knots found... Thu Mar 14 19:54:23 2019 INFO : No lassos found... Thu Mar 14 19:54:23 2019 INFO : Finishing... Thu Mar 14 19:54:24 2019 INFO : Job done Thu Mar 14 19:54:24 2019 STATUS CHANGED : P -> F Thu Mar 14 19:54:24 2019 STATUS CHANGED : F -> F |
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