| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
2YYI |
A |
Unknot |
100.00% |
100.00% |
100.00% |
0.50 |
..Target: ARTGAEYIEALKTRPPNLWYKGEKVEDPTTHPVFRGIVRTMAALYDLQHDPRYREVLTYEEEGKRHGMSFLIPKTKEDLKRRGQAYKLWADQNLGMMGRSPDYLNAVVMAYAASADYFGEFAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPYIPVGVVKQTEKGIVVRGARMTATFPLADEVLIFPSTLLQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYAATGALNHMAHQVVALKTAKTEAFLGVAALMAEGIGADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLITLPSEKDFKGPLGPFLEKFLQGAALEAKERVALFRLAWDMTLSGFGARQELYERFFFGDPVRMYQTLYNVYNKEPYKERIRAFLKESLKVFE |
||||
Fri Jan 11 10:32:57 2019 JOB CREATED : 3b9c8140-feff-4a02-9de7-28f0f75248ac Fri Jan 11 10:33:02 2019 STATUS CHANGED : N -> R Fri Jan 11 10:33:02 2019 INFO : JOB STARTED AT: 2019-01-11 10:33:02.052157 Fri Jan 11 10:33:02 2019 INFO : METHOD: 1 Fri Jan 11 10:33:02 2019 INFO : Building Profile... Fri Jan 11 10:33:02 2019 INFO : --E-value set to 0.001-- Fri Jan 11 10:43:24 2019 INFO : Homologue pool found... Fri Jan 11 10:43:24 2019 INFO : Verifying structure sequences of homologues... Fri Jan 11 10:44:00 2019 INFO : Starting homologue filtering... Fri Jan 11 10:45:07 2019 INFO : Getting structures from PDB... Fri Jan 11 10:45:14 2019 INFO : Creating modelling alignment... Fri Jan 11 10:45:14 2019 INFO : Modelling... Fri Jan 11 10:49:08 2019 INFO : Model 1 built Fri Jan 11 10:49:08 2019 INFO : Validating Calpha distances... Fri Jan 11 10:49:08 2019 INFO : Model 1 distances correct: True Fri Jan 11 10:49:08 2019 INFO : Modelling... Fri Jan 11 10:51:24 2019 INFO : Model 2 built Fri Jan 11 10:51:24 2019 INFO : Validating Calpha distances... Fri Jan 11 10:51:24 2019 INFO : Model 2 distances correct: True Fri Jan 11 10:51:24 2019 INFO : Modelling... Fri Jan 11 10:53:41 2019 INFO : Model 3 built Fri Jan 11 10:53:41 2019 INFO : Validating Calpha distances... Fri Jan 11 10:53:41 2019 INFO : Model 3 distances correct: True Fri Jan 11 10:53:41 2019 INFO : Modelling... Fri Jan 11 10:55:59 2019 INFO : Model 4 built Fri Jan 11 10:55:59 2019 INFO : Validating Calpha distances... Fri Jan 11 10:55:59 2019 INFO : Model 4 distances correct: True Fri Jan 11 10:55:59 2019 INFO : Modelling... Fri Jan 11 10:58:17 2019 INFO : Model 5 built Fri Jan 11 10:58:17 2019 INFO : Validating Calpha distances... Fri Jan 11 10:58:17 2019 INFO : Model 5 distances correct: True Fri Jan 11 10:58:51 2019 INFO : Finished modelling Fri Jan 11 10:58:51 2019 STATUS CHANGED : R -> P Fri Jan 11 10:59:23 2019 INFO : Finished edm surfaces: success Fri Jan 11 10:59:23 2019 INFO : Checking topology... Fri Jan 11 11:00:50 2019 INFO : Knot matrices done... Fri Jan 11 11:00:50 2019 INFO : No knots found... Fri Jan 11 11:00:50 2019 INFO : No lassos found... Fri Jan 11 11:00:50 2019 INFO : Finishing... Fri Jan 11 11:00:51 2019 INFO : Job done Fri Jan 11 11:00:51 2019 STATUS CHANGED : P -> F Fri Jan 11 11:00:51 2019 STATUS CHANGED : F -> F |
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