| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
3ADU |
B |
Unknot |
99.62% |
100.00% |
100.00% |
0.75 |
..Target: -SADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIY |
||||
Tue Feb 26 17:04:27 2019 JOB CREATED : 680babcc-46e7-4b64-a84a-89574c99af30 Tue Feb 26 17:05:01 2019 STATUS CHANGED : N -> R Tue Feb 26 17:05:01 2019 INFO : JOB STARTED AT: 2019-02-26 17:05:01.905066 Tue Feb 26 17:05:01 2019 INFO : METHOD: 1 Tue Feb 26 17:05:01 2019 INFO : Building Profile... Tue Feb 26 17:05:01 2019 INFO : --E-value set to 0.001-- Tue Feb 26 17:13:33 2019 INFO : Homologue pool found... Tue Feb 26 17:13:33 2019 INFO : Verifying structure sequences of homologues... Tue Feb 26 18:31:21 2019 INFO : Starting homologue filtering... Tue Feb 26 18:32:44 2019 INFO : Getting structures from PDB... Tue Feb 26 18:32:48 2019 INFO : Creating modelling alignment... Tue Feb 26 18:32:48 2019 INFO : Modelling... Tue Feb 26 18:44:38 2019 INFO : Model 1 built Tue Feb 26 18:44:38 2019 INFO : Validating Calpha distances... Tue Feb 26 18:44:38 2019 INFO : Model 1 distances correct: True Tue Feb 26 18:44:38 2019 INFO : Modelling... Tue Feb 26 18:51:38 2019 INFO : Model 2 built Tue Feb 26 18:51:38 2019 INFO : Validating Calpha distances... Tue Feb 26 18:51:38 2019 INFO : Model 2 distances correct: True Tue Feb 26 18:51:38 2019 INFO : Modelling... Tue Feb 26 19:03:26 2019 INFO : Model 3 built Tue Feb 26 19:03:26 2019 INFO : Validating Calpha distances... Tue Feb 26 19:03:26 2019 INFO : Model 3 distances correct: True Tue Feb 26 19:03:26 2019 INFO : Modelling... Tue Feb 26 19:15:09 2019 INFO : Model 4 built Tue Feb 26 19:15:09 2019 INFO : Validating Calpha distances... Tue Feb 26 19:15:09 2019 INFO : Model 4 distances correct: True Tue Feb 26 19:15:09 2019 INFO : Modelling... Tue Feb 26 19:25:55 2019 INFO : Model 5 built Tue Feb 26 19:25:55 2019 INFO : Validating Calpha distances... Tue Feb 26 19:25:55 2019 INFO : Model 5 distances correct: True Tue Feb 26 19:26:11 2019 INFO : Finished modelling Tue Feb 26 19:26:11 2019 STATUS CHANGED : R -> P Tue Feb 26 19:26:24 2019 INFO : Finished edm surfaces: success Tue Feb 26 19:26:24 2019 INFO : Checking topology... Tue Feb 26 19:26:25 2019 INFO : Knot matrices done... Tue Feb 26 19:26:25 2019 INFO : No knots found... Tue Feb 26 19:26:25 2019 INFO : No lassos found... Tue Feb 26 19:26:25 2019 INFO : Finishing... Tue Feb 26 19:26:25 2019 INFO : Job done Tue Feb 26 19:26:25 2019 STATUS CHANGED : P -> F Tue Feb 26 19:26:25 2019 STATUS CHANGED : F -> F |
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