| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
3NE8 |
A |
Unknot |
38.94% |
53.85% |
15.38% |
0.96 |
..Target: FQGHMQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGK--INKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGI---------KAYFA |
||||
1JWQ |
A |
Unknot |
36.31% |
46.15% |
15.38% |
0.89 |
..Target: FQGHMQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVG-KYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYF--A |
||||
Fri Dec 1 09:51:22 2017 JOB CREATED : 6caf8496-dd9a-497d-99d7-80cd47a08328 Sat Dec 2 05:00:02 2017 STATUS CHANGED : N -> R Sat Dec 2 05:00:02 2017 INFO : JOB STARTED AT: 2017-12-02 05:00:02.625905 Sat Dec 2 05:00:02 2017 INFO : METHOD: 1 Sat Dec 2 05:00:02 2017 INFO : Precalculated profile found... Sat Dec 2 05:00:02 2017 INFO : Homologue pool found... Sat Dec 2 05:00:02 2017 INFO : Verifying structure sequences of homologues... Sat Dec 2 05:00:05 2017 INFO : Starting homologue filtering... Sat Dec 2 05:00:09 2017 INFO : Getting structures from PDB... Sat Dec 2 05:00:14 2017 INFO : Creating modelling alignment... Sat Dec 2 05:00:14 2017 INFO : Modelling... Sat Dec 2 05:14:57 2017 INFO : Model 1 built Sat Dec 2 05:14:57 2017 INFO : Validating Calpha distances... Sat Dec 2 05:14:57 2017 INFO : Model 1 distances correct: True Sat Dec 2 05:14:57 2017 INFO : Modelling... Sat Dec 2 05:23:54 2017 INFO : Model 2 built Sat Dec 2 05:23:54 2017 INFO : Validating Calpha distances... Sat Dec 2 05:23:54 2017 INFO : Model 2 distances correct: True Sat Dec 2 05:23:54 2017 INFO : Modelling... Sat Dec 2 05:38:50 2017 INFO : Model 3 built Sat Dec 2 05:38:50 2017 INFO : Validating Calpha distances... Sat Dec 2 05:38:50 2017 INFO : Model 3 distances correct: True Sat Dec 2 05:38:50 2017 INFO : Modelling... Sat Dec 2 05:48:09 2017 INFO : Model 4 built Sat Dec 2 05:48:09 2017 INFO : Validating Calpha distances... Sat Dec 2 05:48:09 2017 INFO : Model 4 distances correct: True Sat Dec 2 05:48:09 2017 INFO : Modelling... Sat Dec 2 06:03:36 2017 INFO : Model 5 built Sat Dec 2 06:03:36 2017 INFO : Validating Calpha distances... Sat Dec 2 06:03:36 2017 INFO : Model 5 distances correct: True Sat Dec 2 06:04:23 2017 INFO : Finished modelling Sat Dec 2 06:04:23 2017 STATUS CHANGED : R -> P Sat Dec 2 06:04:23 2017 INFO : Checking topology... Sat Dec 2 06:06:02 2017 INFO : Knot matrices done... Sat Dec 2 06:06:02 2017 INFO : No knots found... Sat Dec 2 06:06:02 2017 INFO : No lassos found... Sat Dec 2 06:06:02 2017 INFO : Finishing... Sat Dec 2 06:06:02 2017 STATUS CHANGED : P -> E Sat Dec 2 06:06:02 2017 ERROR : Error while finishing Sat Dec 2 06:06:02 2017 STATUS CHANGED : E -> F |
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