| Model | Type | Knot core | Slipknot | Lasso | Piercing | Show | |||
|---|---|---|---|---|---|---|---|---|---|
| range | loop range | loop | position | in JSmol | |||||
| Model 5 | Slipknot | S -31 | 27-239 | 239-251 | -- | -- | |||
| Lasso | L -1C | -- | -- | 2-148 | |||||
| None | |||||||||
| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
2A45 |
B |
Unknot |
100.00% |
125.00% |
125.00% |
0.87 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
2A45 |
E |
Unknot |
100.00% |
125.00% |
125.00% |
0.92 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1ABJ |
H |
Unknot |
100.00% |
125.00% |
125.00% |
0.60 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1A3B |
H |
Unknot |
100.00% |
58.33% |
58.33% |
0.49 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1A3E |
H |
Unknot |
100.00% |
58.33% |
58.33% |
0.46 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1AE8 |
H |
Unknot |
99.60% |
58.33% |
58.33% |
0.49 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
1AFE |
H |
Unknot |
99.60% |
58.33% |
58.33% |
0.48 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
1A2C |
H |
Unknot |
99.60% |
47.22% |
47.22% |
0.57 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
2A2X |
H |
Unknot |
100.00% |
47.22% |
47.22% |
0.49 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
5A2M |
H |
Unknot |
100.00% |
47.22% |
47.22% |
0.51 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1ABI |
H |
Unknot |
99.60% |
47.22% |
47.22% |
0.52 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
1AD8 |
H |
Unknot |
100.00% |
47.22% |
47.22% |
0.51 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
5AF9 |
H |
Unknot |
100.00% |
47.22% |
47.22% |
0.55 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
5AFY |
H |
Unknot |
100.00% |
47.22% |
47.22% |
0.51 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
2A0Q |
D |
Unknot |
99.59% |
36.11% |
36.11% |
0.77 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1A46 |
H |
Unknot |
100.00% |
36.11% |
36.11% |
0.52 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1A4W |
H |
Unknot |
100.00% |
36.11% |
36.11% |
0.52 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1A5G |
H |
Unknot |
100.00% |
36.11% |
36.11% |
0.50 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
1A61 |
H |
Unknot |
100.00% |
36.11% |
36.11% |
0.49 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
2AFQ |
D |
Unknot |
100.00% |
25.00% |
25.00% |
0.78 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
2A0Q |
B |
Unknot |
99.59% |
25.00% |
25.00% |
0.67 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG |
||||
2AFQ |
B |
Unknot |
99.59% |
25.00% |
25.00% |
0.80 |
..Target: DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
2A0Q |
A |
Unknot |
93.33% |
25.00% |
25.00% |
0.78 |
..Target: -DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
1A2C |
L |
Unknot |
77.78% |
25.00% |
25.00% |
0.60 |
..Target: -------DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
2A2X |
L |
Unknot |
82.35% |
25.00% |
25.00% |
0.57 |
..Target: -----DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
2A45 |
A |
Unknot |
87.50% |
25.00% |
25.00% |
0.98 |
..Target: ---DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
2A45 |
D |
Unknot |
87.50% |
25.00% |
25.00% |
0.88 |
..Target: ---DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
1ABI |
L |
Unknot |
84.85% |
25.00% |
25.00% |
0.65 |
..Target: ----DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
1AE8 |
L |
Unknot |
77.78% |
25.00% |
25.00% |
0.61 |
..Target: -------DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
1AFE |
L |
Unknot |
77.78% |
25.00% |
25.00% |
0.61 |
..Target: -------DCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG- |
||||
| PDB code |
Chain | Knot type |
Gap coverage |
Gap identity |
>Target_Sequence: gap | LKETWTANVGKGQPS |
|||
|---|---|---|---|---|---|---|---|---|---|
| 2A45 | B | Unknot | 100.00% | 100.00% | LKETWTANVGKGQPS |
||||
| 2A45 | E | Unknot | 100.00% | 100.00% | LKETWTANVGKGQPS |
||||
| 1ABJ | H | Unknot | 100.00% | 100.00% | LKETWTANVGKGQPS |
||||
| 1A3B | H | Unknot | 33.33% | 33.33% | LKET------KGQPS |
||||
| 1A3E | H | Unknot | 33.33% | 33.33% | LKET------KGQPS |
||||
| 1AE8 | H | Unknot | 33.33% | 33.33% | LKETW------GQPS |
||||
| 1AFE | H | Unknot | 33.33% | 33.33% | LKETW------GQPS |
||||
| 1A2C | H | Unknot | 22.22% | 22.22% | LKET-------GQPS |
||||
| 2A2X | H | Unknot | 22.22% | 22.22% | LKET-------GQPS |
||||
| 5A2M | H | Unknot | 22.22% | 22.22% | LKET-------GQPS |
||||
| 1ABI | H | Unknot | 22.22% | 22.22% | LKET-------GQPS |
||||
| 1AD8 | H | Unknot | 22.22% | 22.22% | LKET-------GQPS |
||||
| 5AF9 | H | Unknot | 22.22% | 22.22% | LKET-------GQPS |
||||
| 5AFY | H | Unknot | 22.22% | 22.22% | LKET-------GQPS |
||||
| 2A0Q | D | Unknot | 11.11% | 11.11% | LKET--------QPS |
||||
| 1A46 | H | Unknot | 11.11% | 11.11% | LKE--------GQPS |
||||
| 1A4W | H | Unknot | 11.11% | 11.11% | LKE--------GQPS |
||||
| 1A5G | H | Unknot | 11.11% | 11.11% | LKE--------GQPS |
||||
| 1A61 | H | Unknot | 11.11% | 11.11% | LKE--------GQPS |
||||
| 2AFQ | D | Unknot | 0.00% | 0.00% | -------------PS |
||||
| 2A0Q | B | Unknot | 0.00% | 0.00% | --------------S |
||||
| 2AFQ | B | Unknot | 0.00% | 0.00% | --------------S |
||||
| 2A0Q | A | Unknot | 0.00% | 0.00% | --------------- |
||||
| 1A2C | L | Unknot | 0.00% | 0.00% | --------------- |
||||
| 2A2X | L | Unknot | 0.00% | 0.00% | --------------- |
||||
| 2A45 | A | Unknot | 0.00% | 0.00% | --------------- |
||||
| 2A45 | D | Unknot | 0.00% | 0.00% | --------------- |
||||
| 1ABI | L | Unknot | 0.00% | 0.00% | --------------- |
||||
| 1AE8 | L | Unknot | 0.00% | 0.00% | --------------- |
||||
| 1AFE | L | Unknot | 0.00% | 0.00% | --------------- |
||||
| PDB code |
Chain | Knot type |
Gap coverage |
Gap identity |
>Target_Sequence: gap | SYIDGRIVEG |
|||
|---|---|---|---|---|---|---|---|---|---|
| 2A45 | B | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 2A45 | E | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1ABJ | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1A3B | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1A3E | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1AE8 | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1AFE | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1A2C | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 2A2X | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 5A2M | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1ABI | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1AD8 | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 5AF9 | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 5AFY | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 2A0Q | D | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1A46 | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1A4W | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1A5G | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 1A61 | H | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 2AFQ | D | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 2A0Q | B | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 2AFQ | B | Unknot | 25.00% | 25.00% | ------IVEG |
||||
| 2A0Q | A | Unknot | 25.00% | 25.00% | SYID------ |
||||
| 1A2C | L | Unknot | 25.00% | 25.00% | SYID------ |
||||
| 2A2X | L | Unknot | 25.00% | 25.00% | SYID------ |
||||
| 2A45 | A | Unknot | 25.00% | 25.00% | SYID------ |
||||
| 2A45 | D | Unknot | 25.00% | 25.00% | SYID------ |
||||
| 1ABI | L | Unknot | 25.00% | 25.00% | SYID------ |
||||
| 1AE8 | L | Unknot | 25.00% | 25.00% | SYID------ |
||||
| 1AFE | L | Unknot | 25.00% | 25.00% | SYID------ |
||||
|
Models Similarity profile Modelling alignment Raw knot fingerprint matrices: Model_5 |
Tue Jul 11 17:33:15 2017 JOB CREATED : 70458761-fd4a-477a-8125-0041ed34b166 Wed Jul 12 04:28:02 2017 STATUS CHANGED : N -> R Wed Jul 12 04:28:02 2017 INFO : JOB STARTED AT: 2017-07-12 04:28:02.850572 Wed Jul 12 04:28:02 2017 INFO : METHOD: 1 Wed Jul 12 04:28:02 2017 INFO : Precalculated profile found... Wed Jul 12 04:28:03 2017 INFO : Homologue pool found... Wed Jul 12 04:28:03 2017 INFO : Verifying structure sequences of homologues... Wed Jul 12 05:11:21 2017 INFO : Starting homologue filtering... Wed Jul 12 05:20:15 2017 INFO : Getting structures from PDB... Wed Jul 12 05:21:19 2017 INFO : Creating modelling alignment... Wed Jul 12 05:21:19 2017 INFO : Modelling... Wed Jul 12 06:17:41 2017 INFO : Finished modelling Wed Jul 12 06:17:41 2017 STATUS CHANGED : R -> P Wed Jul 12 06:17:41 2017 INFO : Checking topology... Wed Jul 12 06:23:41 2017 INFO : Knot matrices done... Wed Jul 12 06:23:58 2017 INFO : Some knots found! Wed Jul 12 06:24:04 2017 INFO : Some lassos found! Wed Jul 12 06:24:04 2017 INFO : Finishing... Wed Jul 12 06:24:04 2017 INFO : Job done Wed Jul 12 06:24:04 2017 STATUS CHANGED : P -> F Wed Jul 12 06:24:04 2017 STATUS CHANGED : F -> F |
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