| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
5UEN |
B |
Unknown |
73.89% |
100.00% |
40.00% |
1.19 |
..Target: ISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQ-----------------------------LNKKVSASSGDPQK--------------------------------------------------YYGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLK-------- |
||||
Thu Jun 21 20:55:19 2018 JOB CREATED : 80f31766-5890-4366-b16f-cb8ef88f0d3c Thu Jun 21 20:56:02 2018 STATUS CHANGED : N -> R Thu Jun 21 20:56:02 2018 INFO : JOB STARTED AT: 2018-06-21 20:56:02.623542 Thu Jun 21 20:56:02 2018 INFO : METHOD: 1 Thu Jun 21 20:56:02 2018 INFO : Building Profile... Thu Jun 21 20:56:02 2018 INFO : --E-value set to 0.001-- Thu Jun 21 21:15:22 2018 INFO : Homologue pool found... Thu Jun 21 21:15:22 2018 INFO : Verifying structure sequences of homologues... Thu Jun 21 21:21:34 2018 INFO : Starting homologue filtering... Thu Jun 21 21:22:39 2018 INFO : Getting structures from PDB... Thu Jun 21 21:22:45 2018 INFO : Creating modelling alignment... Thu Jun 21 21:22:45 2018 INFO : Modelling... Thu Jun 21 21:29:58 2018 INFO : Model 1 built Thu Jun 21 21:29:58 2018 INFO : Validating Calpha distances... Thu Jun 21 21:29:58 2018 INFO : Model 1 distances correct: True Thu Jun 21 21:29:58 2018 INFO : Modelling... Thu Jun 21 21:35:17 2018 INFO : Model 2 built Thu Jun 21 21:35:17 2018 INFO : Validating Calpha distances... Thu Jun 21 21:35:17 2018 INFO : Model 2 distances correct: True Thu Jun 21 21:35:17 2018 INFO : Modelling... Thu Jun 21 21:38:16 2018 INFO : Model 3 built Thu Jun 21 21:38:16 2018 INFO : Validating Calpha distances... Thu Jun 21 21:38:16 2018 INFO : Model 3 distances correct: True Thu Jun 21 21:38:16 2018 INFO : Modelling... Thu Jun 21 21:41:25 2018 INFO : Model 4 built Thu Jun 21 21:41:25 2018 INFO : Validating Calpha distances... Thu Jun 21 21:41:25 2018 INFO : Model 4 distances correct: True Thu Jun 21 21:41:25 2018 INFO : Modelling... Thu Jun 21 21:48:54 2018 INFO : Model 5 built Thu Jun 21 21:48:54 2018 INFO : Validating Calpha distances... Thu Jun 21 21:48:54 2018 INFO : Model 5 distances correct: True Thu Jun 21 21:49:31 2018 INFO : Finished modelling Thu Jun 21 21:49:31 2018 STATUS CHANGED : R -> P Thu Jun 21 21:49:33 2018 INFO : Finished edm surfaces: no map Thu Jun 21 21:49:33 2018 INFO : Checking topology... Thu Jun 21 21:49:34 2018 INFO : Knot matrices done... Thu Jun 21 21:49:34 2018 INFO : No knots found... Thu Jun 21 21:49:36 2018 INFO : No lassos found... Thu Jun 21 21:49:36 2018 INFO : Finishing... Thu Jun 21 21:49:36 2018 INFO : Job done Thu Jun 21 21:49:36 2018 STATUS CHANGED : P -> F Thu Jun 21 21:49:36 2018 STATUS CHANGED : F -> F |
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