| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
4GU6 |
A |
Unknot |
60.52% |
100.00% |
64.71% |
0.93 |
..Target: ---IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM |
||||
Wed Aug 9 20:16:14 2017 JOB CREATED : 84d970e1-66c1-4b68-a8af-2851923293d7 Wed Aug 9 20:17:01 2017 STATUS CHANGED : N -> R Wed Aug 9 20:17:01 2017 INFO : JOB STARTED AT: 2017-08-09 20:17:01.775435 Wed Aug 9 20:17:01 2017 INFO : METHOD: 1 Wed Aug 9 20:17:01 2017 INFO : Building Profile... Wed Aug 9 20:17:01 2017 INFO : --E-value set to 0.001-- Wed Aug 9 20:31:46 2017 INFO : Homologue pool found... Wed Aug 9 20:31:46 2017 INFO : Verifying structure sequences of homologues... Wed Aug 9 22:54:53 2017 INFO : Starting homologue filtering... Wed Aug 9 22:55:26 2017 INFO : Getting structures from PDB... Wed Aug 9 22:55:28 2017 INFO : Creating modelling alignment... Wed Aug 9 22:55:28 2017 INFO : Modelling... Wed Aug 9 23:00:46 2017 INFO : Model 1 built Wed Aug 9 23:00:46 2017 INFO : Validating Calpha distances... Wed Aug 9 23:00:46 2017 INFO : Model 1 distances correct: True Wed Aug 9 23:00:46 2017 INFO : Modelling... Wed Aug 9 23:06:14 2017 INFO : Model 2 built Wed Aug 9 23:06:14 2017 INFO : Validating Calpha distances... Wed Aug 9 23:06:14 2017 INFO : Model 2 distances correct: True Wed Aug 9 23:06:14 2017 INFO : Modelling... Wed Aug 9 23:15:08 2017 INFO : Model 3 built Wed Aug 9 23:15:08 2017 INFO : Validating Calpha distances... Wed Aug 9 23:15:08 2017 INFO : Model 3 distances correct: True Wed Aug 9 23:15:08 2017 INFO : Modelling... Wed Aug 9 23:24:21 2017 INFO : Model 4 built Wed Aug 9 23:24:21 2017 INFO : Validating Calpha distances... Wed Aug 9 23:24:21 2017 INFO : Model 4 distances correct: True Wed Aug 9 23:24:21 2017 INFO : Modelling... Wed Aug 9 23:29:37 2017 INFO : Model 5 built Wed Aug 9 23:29:37 2017 INFO : Validating Calpha distances... Wed Aug 9 23:29:37 2017 INFO : Model 5 distances correct: True Wed Aug 9 23:29:55 2017 INFO : Finished modelling Wed Aug 9 23:29:55 2017 STATUS CHANGED : R -> P Wed Aug 9 23:29:55 2017 INFO : Checking topology... Wed Aug 9 23:30:37 2017 INFO : Knot matrices done... Wed Aug 9 23:30:37 2017 INFO : No knots found... Wed Aug 9 23:30:39 2017 INFO : No lassos found... Wed Aug 9 23:30:39 2017 INFO : Finishing... Wed Aug 9 23:30:39 2017 INFO : Job done Wed Aug 9 23:30:39 2017 STATUS CHANGED : P -> F Wed Aug 9 23:30:39 2017 STATUS CHANGED : F -> F |
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