| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
1L2J |
B |
Unknot |
95.96% |
90.00% |
90.00% |
0.91 |
..Target: -------ALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEMLNAHVLR |
||||
3OLL |
A |
Unknot |
99.57% |
80.00% |
80.00% |
0.83 |
..Target: ALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEMLNAHVLR |
||||
Tue Apr 23 14:11:03 2019 JOB CREATED : 9dddafd2-15ec-4f6a-89ea-011d357113bf Tue Apr 23 14:12:01 2019 STATUS CHANGED : N -> R Tue Apr 23 14:12:01 2019 INFO : JOB STARTED AT: 2019-04-23 14:12:01.687643 Tue Apr 23 14:12:01 2019 INFO : METHOD: 1 Tue Apr 23 14:12:01 2019 INFO : Building Profile... Tue Apr 23 14:12:01 2019 INFO : --E-value set to 1.0-- Tue Apr 23 14:25:23 2019 INFO : Homologue pool found... Tue Apr 23 14:25:23 2019 INFO : Verifying structure sequences of homologues... Tue Apr 23 15:26:53 2019 INFO : Starting homologue filtering... Tue Apr 23 15:28:18 2019 INFO : Getting structures from PDB... Tue Apr 23 15:28:23 2019 INFO : Creating modelling alignment... Tue Apr 23 15:28:23 2019 INFO : Adding other chains Tue Apr 23 15:28:24 2019 INFO : Modelling... Tue Apr 23 15:32:40 2019 INFO : Model 1 built Tue Apr 23 15:32:40 2019 INFO : Validating Calpha distances... Tue Apr 23 15:32:40 2019 INFO : Model 1 distances correct: True Tue Apr 23 15:32:40 2019 INFO : Modelling... Tue Apr 23 15:36:52 2019 INFO : Model 2 built Tue Apr 23 15:36:52 2019 INFO : Validating Calpha distances... Tue Apr 23 15:36:52 2019 INFO : Model 2 distances correct: True Tue Apr 23 15:36:52 2019 INFO : Modelling... Tue Apr 23 15:41:07 2019 INFO : Model 3 built Tue Apr 23 15:41:07 2019 INFO : Validating Calpha distances... Tue Apr 23 15:41:07 2019 INFO : Model 3 distances correct: True Tue Apr 23 15:41:07 2019 INFO : Modelling... Tue Apr 23 15:45:23 2019 INFO : Model 4 built Tue Apr 23 15:45:23 2019 INFO : Validating Calpha distances... Tue Apr 23 15:45:23 2019 INFO : Model 4 distances correct: True Tue Apr 23 15:45:23 2019 INFO : Modelling... Tue Apr 23 15:49:37 2019 INFO : Model 5 built Tue Apr 23 15:49:37 2019 INFO : Validating Calpha distances... Tue Apr 23 15:49:37 2019 INFO : Model 5 distances correct: True Tue Apr 23 15:50:12 2019 INFO : Finished modelling Tue Apr 23 15:50:12 2019 STATUS CHANGED : R -> P Tue Apr 23 15:50:19 2019 INFO : Finished edm surfaces: success Tue Apr 23 15:50:19 2019 INFO : Checking topology... Tue Apr 23 15:50:20 2019 INFO : Knot matrices done... Tue Apr 23 15:50:20 2019 INFO : No knots found... Tue Apr 23 15:50:20 2019 INFO : No lassos found... Tue Apr 23 15:50:20 2019 INFO : Finishing... Tue Apr 23 15:50:20 2019 INFO : Job done Tue Apr 23 15:50:20 2019 STATUS CHANGED : P -> F Tue Apr 23 15:50:20 2019 STATUS CHANGED : F -> F |
GapRepairer