| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
4H3Y |
A |
K +31 |
38.04% |
100.00% |
40.00% |
1.29 |
..Target: NPLRFFVLTIFPHIISCYSEYGIVKQAIKKGKVEVYPIDLREFAPKG--QVDDVPYGGLPGMVLKPEPIYEAYD-----YVVENYGKPFVLITEPWGEKLNQKLVNELSKKERIMIICGRYEGVDER-VKKIVDMEISLGDFILSGGEIVALAVIDAVSRVLPGVLSEPQSIQEDSFQNRWLGYPVYTRPREYRGMKVPEELLSGHHKLIELWKLWHRIENTVKKRPDLI-------------PKDLTELEKD--- |
||||
Mon Nov 6 19:16:56 2017 JOB CREATED : 9f35c979-c5d7-4db0-abbe-19b61b1f068b Mon Nov 6 19:17:01 2017 STATUS CHANGED : N -> R Mon Nov 6 19:17:01 2017 INFO : JOB STARTED AT: 2017-11-06 19:17:01.784722 Mon Nov 6 19:17:01 2017 INFO : METHOD: 1 Mon Nov 6 19:17:01 2017 INFO : Precalculated profile found... Mon Nov 6 19:17:01 2017 INFO : Homologue pool found... Mon Nov 6 19:17:01 2017 INFO : Verifying structure sequences of homologues... Mon Nov 6 19:17:45 2017 INFO : Starting homologue filtering... Mon Nov 6 19:18:08 2017 INFO : Getting structures from PDB... Mon Nov 6 19:18:12 2017 INFO : Creating modelling alignment... Mon Nov 6 19:18:12 2017 INFO : Modelling... Mon Nov 6 19:19:36 2017 INFO : Model 1 built Mon Nov 6 19:19:36 2017 INFO : Validating Calpha distances... Mon Nov 6 19:19:36 2017 INFO : Model 1 distances correct: True Mon Nov 6 19:19:36 2017 INFO : Modelling... Mon Nov 6 19:20:53 2017 INFO : Model 2 built Mon Nov 6 19:20:53 2017 INFO : Validating Calpha distances... Mon Nov 6 19:20:53 2017 INFO : Model 2 distances correct: True Mon Nov 6 19:20:53 2017 INFO : Modelling... Mon Nov 6 19:22:12 2017 INFO : Model 3 built Mon Nov 6 19:22:12 2017 INFO : Validating Calpha distances... Mon Nov 6 19:22:12 2017 INFO : Model 3 distances correct: True Mon Nov 6 19:22:12 2017 INFO : Modelling... Mon Nov 6 19:23:34 2017 INFO : Model 4 built Mon Nov 6 19:23:34 2017 INFO : Validating Calpha distances... Mon Nov 6 19:23:34 2017 INFO : Model 4 distances correct: True Mon Nov 6 19:23:34 2017 INFO : Modelling... Mon Nov 6 19:24:52 2017 INFO : Model 5 built Mon Nov 6 19:24:52 2017 INFO : Validating Calpha distances... Mon Nov 6 19:24:52 2017 INFO : Model 5 distances correct: True Mon Nov 6 19:25:05 2017 INFO : Finished modelling Mon Nov 6 19:25:05 2017 STATUS CHANGED : R -> P Mon Nov 6 19:25:05 2017 INFO : Checking topology... Mon Nov 6 19:25:29 2017 INFO : Knot matrices done... Mon Nov 6 19:25:29 2017 INFO : No knots found... Mon Nov 6 19:25:29 2017 INFO : No lassos found... Mon Nov 6 19:25:29 2017 INFO : Finishing... Mon Nov 6 19:25:30 2017 INFO : Job done Mon Nov 6 19:25:30 2017 STATUS CHANGED : P -> F Mon Nov 6 19:25:30 2017 STATUS CHANGED : F -> F |
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