| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
3D0E |
A |
Unknot |
97.22% |
33.33% |
28.57% |
0.61 |
..Target: KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQREEQEMFEDFDYIAD-W |
||||
Sun Jul 23 14:59:35 2017 JOB CREATED : b49b6a29-925a-4b62-9091-ace9051ff875 Mon Jul 24 00:25:02 2017 STATUS CHANGED : N -> R Mon Jul 24 00:25:02 2017 INFO : JOB STARTED AT: 2017-07-24 00:25:02.811785 Mon Jul 24 00:25:02 2017 INFO : METHOD: 1 Mon Jul 24 00:25:02 2017 INFO : Precalculated profile found... Mon Jul 24 00:25:02 2017 INFO : Homologue pool found... Mon Jul 24 00:25:02 2017 INFO : Verifying structure sequences of homologues... Mon Jul 24 03:09:18 2017 INFO : Starting homologue filtering... Mon Jul 24 03:10:05 2017 INFO : Getting structures from PDB... Mon Jul 24 03:10:09 2017 INFO : Creating modelling alignment... Mon Jul 24 03:10:09 2017 INFO : Modelling... Mon Jul 24 03:13:00 2017 INFO : Model 1 built Mon Jul 24 03:13:00 2017 INFO : Validating Calpha distances... Mon Jul 24 03:13:00 2017 INFO : Model 1 distances correct: True Mon Jul 24 03:13:00 2017 INFO : Modelling... Mon Jul 24 03:15:47 2017 INFO : Model 2 built Mon Jul 24 03:15:47 2017 INFO : Validating Calpha distances... Mon Jul 24 03:15:47 2017 INFO : Model 2 distances correct: True Mon Jul 24 03:15:47 2017 INFO : Modelling... Mon Jul 24 03:18:37 2017 INFO : Model 3 built Mon Jul 24 03:18:37 2017 INFO : Validating Calpha distances... Mon Jul 24 03:18:37 2017 INFO : Model 3 distances correct: True Mon Jul 24 03:18:37 2017 INFO : Modelling... Mon Jul 24 03:21:30 2017 INFO : Model 4 built Mon Jul 24 03:21:30 2017 INFO : Validating Calpha distances... Mon Jul 24 03:21:30 2017 INFO : Model 4 distances correct: True Mon Jul 24 03:21:30 2017 INFO : Modelling... Mon Jul 24 03:24:19 2017 INFO : Model 5 built Mon Jul 24 03:24:19 2017 INFO : Validating Calpha distances... Mon Jul 24 03:24:19 2017 INFO : Model 5 distances correct: True Mon Jul 24 03:24:45 2017 INFO : Finished modelling Mon Jul 24 03:24:45 2017 STATUS CHANGED : R -> P Mon Jul 24 03:24:45 2017 INFO : Checking topology... Mon Jul 24 03:30:03 2017 INFO : Knot matrices done... Mon Jul 24 03:30:03 2017 INFO : No knots found... Mon Jul 24 03:30:03 2017 INFO : No lassos found... Mon Jul 24 03:30:03 2017 INFO : Finishing... Mon Jul 24 03:30:03 2017 INFO : Job done Mon Jul 24 03:30:03 2017 STATUS CHANGED : P -> F Mon Jul 24 03:30:03 2017 STATUS CHANGED : F -> F |
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