Model | Type | Knot core | Slipknot | Lasso | Piercing | Show | |||
---|---|---|---|---|---|---|---|---|---|
range | loop range | loop | position | in JSmol | |||||
Model 1 | Lasso | L +1C | -- | -- | 21-204 | ||||
Model 2 | Lasso | L +1C | -- | -- | 21-204 | ||||
Model 3 | Lasso | L +1C | -- | -- | 21-204 | ||||
Model 4 | Lasso | L +1C | -- | -- | 21-204 | ||||
Model 5 | Lasso | L +1C | -- | -- | 21-204 | ||||
None |
DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
3JXG |
C |
K +31 |
96.59% |
100.00% |
100.00% |
0.58 |
..Target: -PYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKS |
Fri Dec 1 09:49:05 2017 JOB CREATED : cd607ea0-c84a-4242-b19d-d9c5fab5676c Sat Dec 2 02:20:02 2017 STATUS CHANGED : N -> R Sat Dec 2 02:20:02 2017 INFO : JOB STARTED AT: 2017-12-02 02:20:02.899157 Sat Dec 2 02:20:02 2017 INFO : METHOD: 1 Sat Dec 2 02:20:03 2017 INFO : Precalculated profile found... Sat Dec 2 02:20:03 2017 INFO : Homologue pool found... Sat Dec 2 02:20:03 2017 INFO : Verifying structure sequences of homologues... Sat Dec 2 02:39:14 2017 INFO : Starting homologue filtering... Sat Dec 2 02:40:53 2017 INFO : Getting structures from PDB... Sat Dec 2 02:41:00 2017 INFO : Creating modelling alignment... Sat Dec 2 02:41:00 2017 INFO : Modelling... Sat Dec 2 02:43:24 2017 INFO : Model 1 built Sat Dec 2 02:43:24 2017 INFO : Validating Calpha distances... Sat Dec 2 02:43:24 2017 INFO : Model 1 distances correct: True Sat Dec 2 02:43:24 2017 INFO : Modelling... Sat Dec 2 02:47:24 2017 INFO : Model 2 built Sat Dec 2 02:47:24 2017 INFO : Validating Calpha distances... Sat Dec 2 02:47:24 2017 INFO : Model 2 distances correct: True Sat Dec 2 02:47:24 2017 INFO : Modelling... Sat Dec 2 02:49:33 2017 INFO : Model 3 built Sat Dec 2 02:49:33 2017 INFO : Validating Calpha distances... Sat Dec 2 02:49:33 2017 INFO : Model 3 distances correct: True Sat Dec 2 02:49:33 2017 INFO : Modelling... Sat Dec 2 02:51:41 2017 INFO : Model 4 built Sat Dec 2 02:51:41 2017 INFO : Validating Calpha distances... Sat Dec 2 02:51:41 2017 INFO : Model 4 distances correct: True Sat Dec 2 02:51:41 2017 INFO : Modelling... Sat Dec 2 02:55:30 2017 INFO : Model 5 built Sat Dec 2 02:55:30 2017 INFO : Validating Calpha distances... Sat Dec 2 02:55:30 2017 INFO : Model 5 distances correct: True Sat Dec 2 02:56:05 2017 INFO : Finished modelling Sat Dec 2 02:56:05 2017 STATUS CHANGED : R -> P Sat Dec 2 02:56:05 2017 INFO : Checking topology... Sat Dec 2 02:57:03 2017 INFO : Knot matrices done... Sat Dec 2 02:57:33 2017 INFO : No knots found... Sat Dec 2 02:58:02 2017 INFO : Some lassos found! Sat Dec 2 02:58:02 2017 INFO : Finishing... Sat Dec 2 02:58:02 2017 STATUS CHANGED : P -> E Sat Dec 2 02:58:02 2017 ERROR : Error while finishing Sat Dec 2 02:58:02 2017 STATUS CHANGED : E -> F |