| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
1L2J |
B |
Unknot |
95.52% |
88.89% |
88.89% |
0.84 |
..Target: --------LSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEMLNA |
||||
3OLL |
A |
Unknot |
98.72% |
77.78% |
77.78% |
0.95 |
..Target: -LSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDLVLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMKCKNVVPVYDLLLEMLNA- |
||||
Mon Sep 2 21:58:04 2019 JOB CREATED : cdd12a3b-c7f9-458f-91ad-b8c3e4d35167 Mon Sep 2 21:59:01 2019 STATUS CHANGED : N -> R Mon Sep 2 21:59:01 2019 INFO : JOB STARTED AT: 2019-09-02 21:59:01.856026 Mon Sep 2 21:59:01 2019 INFO : METHOD: 1 Mon Sep 2 21:59:01 2019 INFO : Building Profile... Mon Sep 2 21:59:01 2019 INFO : --E-value set to 0.001-- Mon Sep 2 22:10:14 2019 INFO : Homologue pool found... Mon Sep 2 22:10:14 2019 INFO : Verifying structure sequences of homologues... Mon Sep 2 23:00:18 2019 INFO : Starting homologue filtering... Mon Sep 2 23:00:41 2019 INFO : Getting structures from PDB... Mon Sep 2 23:00:47 2019 INFO : Creating modelling alignment... Mon Sep 2 23:00:47 2019 INFO : Modelling... Mon Sep 2 23:01:54 2019 INFO : Model 1 built Mon Sep 2 23:01:54 2019 INFO : Validating Calpha distances... Mon Sep 2 23:01:54 2019 INFO : Model 1 distances correct: True Mon Sep 2 23:01:54 2019 INFO : Modelling... Mon Sep 2 23:02:54 2019 INFO : Model 2 built Mon Sep 2 23:02:54 2019 INFO : Validating Calpha distances... Mon Sep 2 23:02:54 2019 INFO : Model 2 distances correct: True Mon Sep 2 23:02:54 2019 INFO : Modelling... Mon Sep 2 23:03:58 2019 INFO : Model 3 built Mon Sep 2 23:03:58 2019 INFO : Validating Calpha distances... Mon Sep 2 23:03:58 2019 INFO : Model 3 distances correct: True Mon Sep 2 23:03:58 2019 INFO : Modelling... Mon Sep 2 23:05:01 2019 INFO : Model 4 built Mon Sep 2 23:05:01 2019 INFO : Validating Calpha distances... Mon Sep 2 23:05:01 2019 INFO : Model 4 distances correct: True Mon Sep 2 23:05:01 2019 INFO : Modelling... Mon Sep 2 23:06:02 2019 INFO : Model 5 built Mon Sep 2 23:06:02 2019 INFO : Validating Calpha distances... Mon Sep 2 23:06:02 2019 INFO : Model 5 distances correct: True Mon Sep 2 23:06:18 2019 INFO : Finished modelling Mon Sep 2 23:06:18 2019 STATUS CHANGED : R -> P Mon Sep 2 23:06:19 2019 INFO : Finished edm surfaces: no map Mon Sep 2 23:06:19 2019 INFO : Checking topology... Mon Sep 2 23:06:43 2019 INFO : Knot matrices done... Mon Sep 2 23:06:43 2019 INFO : No knots found... Mon Sep 2 23:06:43 2019 INFO : No lassos found... Mon Sep 2 23:06:43 2019 INFO : Finishing... Mon Sep 2 23:06:43 2019 INFO : Job done Mon Sep 2 23:06:43 2019 STATUS CHANGED : P -> F Mon Sep 2 23:06:43 2019 STATUS CHANGED : F -> F |
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