| DOPE (Discrete Optimized Protein Energy) score per residue. The lower the score, the better. Since DOPE is calculated against the neighbours of a given amino acid, the scores can vary between unmoved segments of different models. See here for more information. |
| PDB code |
Chain | Entanglement type |
Seq identity |
Total gap coverage |
Total gap identity |
RMSD [Å] | Pairwise alignment to the target: gap | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
4BXS |
A |
Unknot |
97.98% |
100.00% |
100.00% |
0.87 |
..Target: --CRVDNGNCWHFCKHVQNDIQCSCAEGYLLGEDGHSCVAGGNFSCGRNIKTRNKREANLPDFVQSQNATLLKKSDNPSPDIRIVNGMDCKLGECPWQAALVDEKEGVFCGGTILSPIYVLTAAHCINETETISVVVGEIDKSRIETGPLLSVDKIYVHKKFVPPQKAYKFDLAAYDYDIAIIQMKTPIQFSENVVPACLPTADFANQVLMKQDFGIVSGFGRIVEKGPKSKTLKVLKVPYVDRHTCMVSSETPITPNMFCAGYDTLPRDACQGDSGGPHTTVYRDTHFITGIVSSGEGCARNGKYGNYTKLSKFIPWIKRIMR-- |
||||
Fri Dec 1 09:51:26 2017 JOB CREATED : e7c6a9d4-9756-49a2-b6c2-5cca7503e632 Sat Dec 2 05:03:02 2017 STATUS CHANGED : N -> R Sat Dec 2 05:03:02 2017 INFO : JOB STARTED AT: 2017-12-02 05:03:02.576666 Sat Dec 2 05:03:02 2017 INFO : METHOD: 1 Sat Dec 2 05:03:02 2017 INFO : Precalculated profile found... Sat Dec 2 05:03:02 2017 INFO : Homologue pool found... Sat Dec 2 05:03:02 2017 INFO : Verifying structure sequences of homologues... Sat Dec 2 06:23:57 2017 INFO : Starting homologue filtering... Sat Dec 2 06:24:58 2017 INFO : Getting structures from PDB... Sat Dec 2 06:25:03 2017 INFO : Creating modelling alignment... Sat Dec 2 06:25:03 2017 INFO : Modelling... Sat Dec 2 06:52:17 2017 INFO : Model 1 built Sat Dec 2 06:52:17 2017 INFO : Validating Calpha distances... Sat Dec 2 06:52:17 2017 INFO : Model 1 distances correct: True Sat Dec 2 06:52:17 2017 INFO : Modelling... Sat Dec 2 07:10:21 2017 INFO : Model 2 built Sat Dec 2 07:10:21 2017 INFO : Validating Calpha distances... Sat Dec 2 07:10:21 2017 INFO : Model 2 distances correct: True Sat Dec 2 07:10:21 2017 INFO : Modelling... Sat Dec 2 07:22:59 2017 INFO : Model 3 built Sat Dec 2 07:22:59 2017 INFO : Validating Calpha distances... Sat Dec 2 07:23:00 2017 INFO : Model 3 distances correct: True Sat Dec 2 07:23:00 2017 INFO : Modelling... Sat Dec 2 07:33:22 2017 INFO : Model 4 built Sat Dec 2 07:33:22 2017 INFO : Validating Calpha distances... Sat Dec 2 07:33:22 2017 INFO : Model 4 distances correct: True Sat Dec 2 07:33:22 2017 INFO : Modelling... Sat Dec 2 07:42:10 2017 INFO : Model 5 built Sat Dec 2 07:42:10 2017 INFO : Validating Calpha distances... Sat Dec 2 07:42:10 2017 INFO : Model 5 distances correct: True Sat Dec 2 07:42:36 2017 INFO : Finished modelling Sat Dec 2 07:42:36 2017 STATUS CHANGED : R -> P Sat Dec 2 07:42:36 2017 INFO : Checking topology... Sat Dec 2 07:43:25 2017 INFO : Knot matrices done... Sat Dec 2 07:43:25 2017 INFO : No knots found... Sat Dec 2 07:43:29 2017 INFO : No lassos found... Sat Dec 2 07:43:29 2017 INFO : Finishing... Sat Dec 2 07:43:29 2017 STATUS CHANGED : P -> E Sat Dec 2 07:43:29 2017 ERROR : Error while finishing Sat Dec 2 07:43:29 2017 STATUS CHANGED : E -> F |
GapRepairer